Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., peptide ABC transporter substrate-binding protein SapA from Erwinia amylovora T8

 Score =  425 bits (1093), Expect = e-123
 Identities = 231/531 (43%), Positives = 320/531 (60%), Gaps = 1/531 (0%)

Query: 7   FTLGLCSMTLLAGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNT 66
           F L L +M++L+          IR SGFVYC      TFNPQLA   +  D L  QIY+ 
Sbjct: 5   FPLLLLAMSVLSTPVWPSSPGDIRQSGFVYCVNGVINTFNPQLASGGLVVDTLAAQIYDR 64

Query: 67  LLTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFR 126
           LL +DP T+  +  LA SW V   G  Y F LR DV+FQ TPWF+PTR +NADDVVFSF 
Sbjct: 65  LLDVDPYTYRLMPELAKSWEVLDNGATYRFHLRHDVSFQHTPWFTPTRAMNADDVVFSFE 124

Query: 127 RIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHA 186
           R+ +  + +H V    YP+F  + F + +  V  L++ TV+  L+ PD SFL ++AT +A
Sbjct: 125 RVFNRHHSWHNVNGGNYPYFDSLQFVDAVQSVKKLNNDTVEIRLNSPDASFLWHLATHYA 184

Query: 187 VILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVV 246
            +LS EYA +L   D +E +D  P+GTGPF L ++     IRL+RH  YW+G  ++ QVV
Sbjct: 185 PVLSNEYAERLTRADHQELMDRQPVGTGPFMLNDFRGGQYIRLQRHDDYWKGQPRMSQVV 244

Query: 247 FDISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPA 306
            DIS  GTG L+KLL  ECDVL  P +SQL  +  +P + L   P MN+A++A NT+   
Sbjct: 245 VDISAGGTGRLSKLLTGECDVLAYPAASQLSILRDDPRLRLTLRPGMNIAYLAFNTRKAP 304

Query: 307 LNDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALL 366
           L+   VR+AL  AIN + ++ S+YYGT   A +ILP  SWAY        Y+   A+  L
Sbjct: 305 LDRPEVRQALALAINNERLMASIYYGTAETAASILPRASWAYDTGAHITPYNPARAREEL 364

Query: 367 REAGFATGLELTMSVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIR 426
           +  G    L LT+ VP   +A+NPSP KTAELIQA+LA IGVT+ ++  +   ++   + 
Sbjct: 365 QALGI-NDLHLTLWVPSASQAWNPSPLKTAELIQADLAQIGVTVTIVPVEGRFQEARLMT 423

Query: 427 NNIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYR 486
            N DL L+GW  D+ DPD+F RPLLSC +  +  N + WC+S FD LL  AL + +   R
Sbjct: 424 MNHDLTLTGWATDSNDPDSFFRPLLSCAAIASQTNYAHWCNSGFDVLLHKALLSQELAKR 483

Query: 487 LNLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPFNVQPFNTVER 537
           ++ Y +AQ +L Q+ PV+PLA+ ++  AY   + G+ +SPF    F  V R
Sbjct: 484 IDYYDRAQMLLAQQLPVLPLAYSLRLQAYRYDIKGLVLSPFGNASFAGVYR 534