Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., peptide ABC transporter substrate-binding protein SapA from Erwinia tracheiphila SCR3

 Score =  409 bits (1052), Expect = e-118
 Identities = 217/509 (42%), Positives = 304/509 (59%), Gaps = 1/509 (0%)

Query: 29  IRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVN 88
           IR SGFVYC     TTFNPQ+    +  D L  Q+Y+ LL +DP T+  +  LA SW V 
Sbjct: 18  IRQSGFVYCVNGTVTTFNPQMVSGGLVVDTLAVQLYDRLLDVDPYTYRLIPELAESWEVL 77

Query: 89  STGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKG 148
             G  Y F LR +VAFQ T WF+P R +NADDVVFSF+RI D  + +H V    YP+F  
Sbjct: 78  DNGATYRFHLRREVAFQKTNWFTPGRLMNADDVVFSFQRIFDRHSAWHNVNGGSYPYFDS 137

Query: 149 IDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDN 208
           + F + +  V   D+ TV   L   D SFL ++AT +A +LS EYA QL     +E+LD+
Sbjct: 138 LQFTDTVQSVRKRDNYTVDIRLKSSDASFLWHLATHYAPVLSAEYAAQLTKAGRQEQLDH 197

Query: 209 LPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVL 268
            P+GTGPF L++Y     IRL R+P YW+G  ++ QVV D+   GTG L+KLL  ECDVL
Sbjct: 198 QPVGTGPFQLSQYRTGQYIRLARNPDYWKGLPRMPQVVIDMGAGGTGRLSKLLTGECDVL 257

Query: 269 NAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDS 328
             P +SQL  +  +P + L     MN+A++A NT+   L+   VR AL  AIN + ++ +
Sbjct: 258 AYPAASQLAVLRNDPRLRLTLRAGMNIAYLAFNTRKAPLDRPEVRHALALAINNERLMAA 317

Query: 329 VYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEPKAY 388
           +YYGT   A +ILP  SWAY  +     Y+   ++  LR  G A  L LT+ VP   +++
Sbjct: 318 IYYGTSETAASILPRASWAYNNNAKVTEYNPQKSRQQLRALGIA-NLHLTLWVPSASQSW 376

Query: 389 NPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFLR 448
           NPSP KTAEL+QA+LA +GV + ++  +   ++   +  N DL L+GW  D+ DPD+F R
Sbjct: 377 NPSPLKTAELLQADLAQVGVRVTIVPVEGRFQEARLMAMNHDLTLTGWATDSNDPDSFFR 436

Query: 449 PLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLAH 508
           PLLSC +  +  N + WCD+ FD  L  AL + +   R++ Y+QAQ +L +  PV+PLA 
Sbjct: 437 PLLSCAAIGSQTNFAHWCDAAFDETLYKALLSQQLSSRIDYYNQAQMLLAESLPVLPLAS 496

Query: 509 GIQFTAYSKSLTGIRISPFNVQPFNTVER 537
            ++  AY   + G+ +SPF    F  V R
Sbjct: 497 SLRLQAYRYDIHGLVLSPFGNASFAGVWR 525