Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., ABC transporter substrate-binding protein from Erwinia tracheiphila SCR3

 Score =  355 bits (910), Expect = e-102
 Identities = 191/534 (35%), Positives = 294/534 (55%), Gaps = 11/534 (2%)

Query: 4   LLRFTLGLCSMTLLAGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQI 63
           +L+  L L ++T+ AG         +++   VYC E +P  FNPQL  +  T DA    I
Sbjct: 10  MLKVGLSLIALTVSAG---------VQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPI 60

Query: 64  YNTLLTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVF 123
           YN L+     T      LA  W +++ G  Y F LR  V +QTT  F P R  NADDVVF
Sbjct: 61  YNRLVEFKTGTTELQPGLAEKWDISADGKTYTFHLREGVKWQTTKDFKPGRDFNADDVVF 120

Query: 124 SFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIAT 183
           SF R +D  N YH +    Y +F+G+D   ++  V  +DD TV+FVL+R +  FL+++  
Sbjct: 121 SFERQLDKNNKYHSLSGGSYEYFEGMDMPKIIEKVEKVDDHTVRFVLTRSEAPFLADLGM 180

Query: 184 SHAVILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVE 243
             A ILS EYA+ ++     EKLD  P+GTGPF L +Y     I  K   QYW    K++
Sbjct: 181 DFASILSAEYADNMLKAGTPEKLDLNPVGTGPFQLMQYQKDSRILYKAFDQYWGNKPKID 240

Query: 244 QVVFDISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQ 303
           ++VF ++   +   AKL + EC V+  P  + L  ++++ +I L   P +NV ++A NT+
Sbjct: 241 RLVFSVTPDASVRYAKLQKGECQVIPFPNPADLARMKEDKNINLMQIPGLNVGYLAFNTE 300

Query: 304 HPALNDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQ 363
              L++ +VR+AL  A+N++ I+D+VY G G  A  ++PPT W Y        YD   A+
Sbjct: 301 KKPLDNVKVRQALIMAVNKKAIIDAVYQGAGQTAKNLIPPTMWGYNDAVQDYPYDTEKAK 360

Query: 364 ALLREAGFATGLELTM-SVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQE 422
           ALL+EAG A G  + + ++PV+ + YNP+ R+ AE++Q + A IGV  ++++ +  E  +
Sbjct: 361 ALLKEAGLADGFTIDLWAMPVQ-RPYNPNARRMAEMVQNDWAKIGVKAKIVTYEWGEYLK 419

Query: 423 LSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANK 482
            +        + GWTGD GDPDNF   L SC + + G N S WC   F+ L+  A     
Sbjct: 420 RAKAGEHQTVMMGWTGDNGDPDNFFATLFSCAAAKEGSNYSRWCYKPFEELIQPARAEAD 479

Query: 483 PRYRLNLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPFNVQPFNTVE 536
              R+  Y QAQ +++++ P + +AH   +   SK ++G  + P     F+ V+
Sbjct: 480 HNKRVEYYKQAQVMMHEQAPALIIAHSTVYEPVSKKVSGYVVDPLGKHHFDNVD 533