Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  375 bits (964), Expect = e-108
 Identities = 194/496 (39%), Positives = 289/496 (58%), Gaps = 2/496 (0%)

Query: 31  SSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVNST 90
           S   +YC E++P +FNPQ+A +  +  A    +YN L+  DP  + PV+SLA SWT++  
Sbjct: 26  SDTLIYCSEASPESFNPQIASSGPSFVASSQVLYNRLINFDPVKNTPVSSLAESWTISPD 85

Query: 91  GLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKGID 150
           G  Y F LR  V F +  +F PTR  NADDV+FS  R  DP +PYH V Q  Y +F  + 
Sbjct: 86  GKTYTFALRKGVKFNSNKYFKPTRDFNADDVIFSVLRQKDPKHPYHNVSQGNYEYFNDVG 145

Query: 151 FQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDNLP 210
              L+ DV  +DD  V+F LS P+ +FL++     A ILS EYA+ ++     E +D  P
Sbjct: 146 LDKLIQDVKKVDDYHVQFTLSEPNAAFLADWGMDFASILSAEYADAMLKKGTPENVDTWP 205

Query: 211 LGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVLNA 270
           +GTGP+ L +Y    LIR   +P YWEG    + ++F I+      LAKL  NEC ++ A
Sbjct: 206 IGTGPYVLQQYKVDSLIRYVANPNYWEGEVPTKHLIFSITPNVETRLAKLQTNECQIIPA 265

Query: 271 PISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDSVY 330
           P   Q  AI+ N D+ L +  A+NV ++A NT+    ++  VR+ALN+A +++ I+++V+
Sbjct: 266 PSPVQFDAIKNNKDLTLHSVDALNVGYLAFNTEKKPFDNVLVRQALNYATDKKAIVNAVF 325

Query: 331 YGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTM-SVPVEPKAYN 389
            G+G++A + +PP    + +D     YD   A+ALL++AG   G E+T+ S+PV+ + YN
Sbjct: 326 MGSGTVAKSPIPPNMLGFNKDLKDYSYDPEKAKALLKQAGLEKGAEVTLWSMPVQ-RPYN 384

Query: 390 PSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFLRP 449
           P+ R+ AE+IQ++ A +GV  +++S +  E      +   D  L GW  D GDPDNF   
Sbjct: 385 PNSRRIAEMIQSDWAKVGVKAKIVSYEWGEYLSGMRKGEHDSALFGWMSDNGDPDNFADV 444

Query: 450 LLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLAHG 509
           LL C+S + G N + WCD  +D L+  A   + P  R  LY QAQ I  Q+ P I LA+G
Sbjct: 445 LLGCNSIKTGSNAARWCDKGYDALVQKAKLTSSPAERAKLYGQAQEIFYQQAPWIALANG 504

Query: 510 IQFTAYSKSLTGIRIS 525
             F A   ++TG  +S
Sbjct: 505 KTFYATRSNVTGYSVS 520