Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  365 bits (936), Expect = e-105
 Identities = 192/533 (36%), Positives = 304/533 (57%), Gaps = 11/533 (2%)

Query: 4   LLRFTLGLCSMTLLAGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQI 63
           +L+F+LGL ++++ AG         +++   VYC E +P  FNPQL  +  T DA    I
Sbjct: 10  VLKFSLGLLALSVAAG---------VQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPI 60

Query: 64  YNTLLTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVF 123
           YN L+     T      LA  W +++ G  Y F LR DV +Q    F P+R  NADDV+F
Sbjct: 61  YNRLVEFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKDFKPSRTFNADDVLF 120

Query: 124 SFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIAT 183
           SF+R ID  +P+HKV    Y +F+G+   +L+  +  +DD TV+F L+R +  FL+++A 
Sbjct: 121 SFQRQIDANHPFHKVSGGSYEYFEGMGMPDLIGKIEKVDDYTVRFQLTRAEAPFLADLAM 180

Query: 184 SHAVILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVE 243
             A I+S EY ++++     EK+D  P+GTGPF L +Y     I  KR   +W     ++
Sbjct: 181 DFASIMSAEYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTKPGID 240

Query: 244 QVVFDISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQ 303
           ++VF I+   +   AKL ++EC V+  P  + L  ++++ +I L   P +NV +++ N +
Sbjct: 241 RLVFSITPDASVRYAKLQKDECQVMPYPNPADLTNMKQDKNIELLQKPGLNVGYLSFNVE 300

Query: 304 HPALNDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQ 363
              L++ ++R+AL +A+N+Q I+++VY G G  A  ++PPT W Y  D     YD   A+
Sbjct: 301 KKPLDNVKIRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYNDDVKDYAYDPAKAK 360

Query: 364 ALLREAGFATGLELTM-SVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQE 422
           ALL+EAG   G E+ + ++PV+ + YNP+ R+ AE+IQA+ A +GV  ++++ +  E  +
Sbjct: 361 ALLKEAGMENGFEIDLWAMPVQ-RPYNPNARRMAEMIQADWAKVGVKAKIVTYEWGEYLK 419

Query: 423 LSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANK 482
            +        L GWTGD GDPDNFL  L SCD+ + G N S WC   F+ L+  A   + 
Sbjct: 420 RAKSGEHQTVLMGWTGDNGDPDNFLATLFSCDAAKKGSNYSKWCYKPFEDLIQPARAVSD 479

Query: 483 PRYRLNLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPFNVQPFNTV 535
              R+ LY QAQ +++ + P + +AH   +    K++ G  I P  V  FN V
Sbjct: 480 QAKRIELYKQAQVVMHDQAPALIVAHSTVYEPIRKNVKGYVIEPRGVHSFNHV 532