Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  368 bits (945), Expect = e-106
 Identities = 203/537 (37%), Positives = 299/537 (55%), Gaps = 13/537 (2%)

Query: 2   NALLRFTLGLCSMTLL-AGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALG 60
           NA+ R  L   ++    A C + +          VYC E +P  FNPQL  +  + DA  
Sbjct: 3   NAITRVALAALTLAAAQAACAKTL----------VYCSEGSPENFNPQLYTSGTSVDASA 52

Query: 61  PQIYNTLLTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADD 120
             IYN L+     T     SLA SW ++  G +Y F LR  V F     F+P+R  NADD
Sbjct: 53  VPIYNRLVDFKVGTTELAPSLAESWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADD 112

Query: 121 VVFSFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSN 180
           V+FSF+R  DP +PYHKV    Y  F+ + F++L+  +  LDD TV+F LS  +  FL++
Sbjct: 113 VIFSFQRQRDPNHPYHKVSGGTYANFESLSFRSLITAIDKLDDYTVRFTLSHAEAPFLAD 172

Query: 181 IATSHAVILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAA 240
           +A   A ILS EYA+Q++     EK+D  P+GTGPF LA+Y     I  +  P YW+G A
Sbjct: 173 LAWYFASILSAEYADQMLKAGTPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPNYWQGKA 232

Query: 241 KVEQVVFDISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAV 300
           K++++VF I+   +   AKL +NEC V+  P  ++L  ++ N DI L     +N+ F+A 
Sbjct: 233 KLDRLVFSITPDASVRYAKLRKNECQVMPFPNPAELADMKNNKDITLMQKAGLNIGFLAF 292

Query: 301 NTQHPALNDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRN 360
           NT+   L++ +VR+AL  AIN+  I+++V+ GTGS A  +LPP  W+   D     YD  
Sbjct: 293 NTRKAPLDNVKVRQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAADLKDYEYDPE 352

Query: 361 YAQALLREAGFATGLELTM-SVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSE 419
            A+ALL++AG A G  + + ++PV+ + YNP+ R+ AE+IQA+ A +GV   ++S +  E
Sbjct: 353 KARALLKDAGLAEGTAIDLWAMPVQ-RPYNPNARRMAEMIQADWAKVGVKANIVSYEWGE 411

Query: 420 RQELSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALE 479
             +          L GWT  TGDPDNF  PL +C S   G N + WC   FD L+  A  
Sbjct: 412 YLKRVRSGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSAKWCYPPFDKLITDARA 471

Query: 480 ANKPRYRLNLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPFNVQPFNTVE 536
               + R+ LY QAQ +++++ P + +AH   F     ++TG  I PF    F  V+
Sbjct: 472 EQDHQKRVELYRQAQFMMHEQAPAVMIAHSTIFEPVRNTVTGYEIDPFGKHIFYQVD 528