Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor from Escherichia coli BL21

 Score =  359 bits (921), Expect = e-103
 Identities = 195/535 (36%), Positives = 291/535 (54%), Gaps = 11/535 (2%)

Query: 2   NALLRFTLGLCSMTLLAGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGP 61
           + +L+  L L +MT+ A          +++   VYC E +P  FNPQL  +  T DA   
Sbjct: 8   SGMLKLGLSLVAMTVAAS---------VQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSV 58

Query: 62  QIYNTLLTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDV 121
            +YN L+     T   +  LA  W V+  G  Y F LR  V +     F PTR LNADDV
Sbjct: 59  PLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDV 118

Query: 122 VFSFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNI 181
           VFSF R  +  NPYHKV    Y +F+G+    L+ +V  +DD TV+FVL+RP+  FL+++
Sbjct: 119 VFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADL 178

Query: 182 ATSHAVILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAK 241
           A   A ILS EYA+ ++     EKLD  P+GTGPF L +Y     IR K    YW    +
Sbjct: 179 AMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQ 238

Query: 242 VEQVVFDISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVN 301
           ++ +VF I+   +   AKL +NEC V+  P  + +  ++++  I L   P +NV +++ N
Sbjct: 239 IDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYN 298

Query: 302 TQHPALNDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNY 361
            Q   L+D +VR+AL +A+N+  I+ +VY G G  A  ++PPT W Y  D     YD   
Sbjct: 299 VQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEK 358

Query: 362 AQALLREAGFATGLELTM-SVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSER 420
           A+ALL+EAG   G  + + ++PV+ + YNP+ R+ AE+IQA+ A +GV  ++++ +  E 
Sbjct: 359 AKALLKEAGLEKGFSIDLWAMPVQ-RPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEY 417

Query: 421 QELSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEA 480
            + +        + GWTGD GDPDNF   L SC ++  G N S WC   F+ L+  A   
Sbjct: 418 LKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARAT 477

Query: 481 NKPRYRLNLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPFNVQPFNTV 535
           +    R+ LY QAQ +++ + P + +AH   F    K + G  + P     F  V
Sbjct: 478 DDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENV 532