Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Regulatory protein AtoC from Xanthobacter sp. DMC5

 Score =  214 bits (544), Expect = 5e-60
 Identities = 130/312 (41%), Positives = 182/312 (58%), Gaps = 17/312 (5%)

Query: 4   SLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCS 63
           +LLGES  F  VL +V+ +AP    VL++GE GTGKEL+A+ +HY S R + P V++NC+
Sbjct: 145 NLLGESAVFHHVLRQVTEVAPSRASVLLLGESGTGKELVARAIHYNSPRRDLPFVAVNCA 204

Query: 64  TLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEY 123
            + E LI+SELFGH  G+FTGA G  +GRF  A  GTLFLDE+A  PL VQ K+LR ++ 
Sbjct: 205 AIPETLIESELFGHVKGAFTGATGVREGRFAAANQGTLFLDEIADMPLPVQAKVLRALQE 264

Query: 124 GQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDI 183
             +E VG ++ ++ +VR++ AT+ +L +    GTFR DL  RLA   I LP LR R +DI
Sbjct: 265 QSFEPVGSSKSVSVDVRIIAATHKDLQKEIAAGTFRMDLYYRLAVFPITLPPLRERTDDI 324

Query: 184 ALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER-AVYQHGLNSQ 242
            LLA+HF     R++   +  G +P A   L  Y WPGNVREL+N +ER A+   G    
Sbjct: 325 VLLADHFLAAATRDMGKRV-KGLTPEAQAMLTRYRWPGNVRELQNCMERAAIVARGDLVG 383

Query: 243 PIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAKF 302
           P D L+F     +D+ +         HT   D    L       + + E +  AL  +  
Sbjct: 384 PGDLLLFEANGDTDVQS---------HTLNGDLDSEL------SRIEREFVLQALKDSGG 428

Query: 303 NQKHAAQLLGLS 314
            Q  AA+ LG++
Sbjct: 429 VQARAAEKLGIT 440