Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  205 bits (521), Expect = 2e-57
 Identities = 110/232 (47%), Positives = 147/232 (63%), Gaps = 1/232 (0%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           +  L   SP+ + VL+   ++A  D  +L++GE GTGK  +A+ +H  SKR ++  V++N
Sbjct: 144 KDGLDSHSPSMMVVLETARQVAGTDANILILGESGTGKGELARAIHGWSKRSKKSCVTIN 203

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C +L+  L++SELFGH  G+FTGA     GR  +A+GGTLFLDE+   PL++Q KLLR I
Sbjct: 204 CPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGDFPLTLQPKLLRFI 263

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           +  +YERVG      A+VR++ ATN NL  M + G FR DLL RL    +HLP LR R E
Sbjct: 264 QDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFREDLLYRLNVITLHLPPLRERSE 323

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERA 233
           DI  LA+ F  R  +E   P   GFS  A   L  Y WPGN+REL+NVVERA
Sbjct: 324 DILTLADRFLARFVKEYARPA-RGFSDEAREALLNYRWPGNIRELRNVVERA 374