Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  207 bits (527), Expect = 4e-58
 Identities = 108/230 (46%), Positives = 148/230 (64%), Gaps = 1/230 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           ++G  P    +  K+ ++AP D  VL+ GE GTGKEL+A+ LH LSKR + P++S+NC+ 
Sbjct: 147 IIGSCPPMQDLYGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSKRAKAPMISVNCAA 206

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           + E LI+SELFGHE G+FTGA     G  E A+GGTLFLDE+   PL  Q +LLRV++ G
Sbjct: 207 IPESLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEG 266

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           +  RVG  Q    +VRL+ AT+ +L  +A+ G FR DL  RL    + LPALR R  D+ 
Sbjct: 267 EIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQFREDLYYRLHVIALKLPALRERGADVN 326

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAV 234
            +A  F +R    +     + F+P+A   ++ YSWPGNVREL+N VERAV
Sbjct: 327 EIAHAFLLRQSARIN-RTDLKFAPDAEQAIRHYSWPGNVRELENAVERAV 375