Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Transcriptional regulator FleQ from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 2e-58
 Identities = 134/341 (39%), Positives = 180/341 (52%), Gaps = 24/341 (7%)

Query: 3   QSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNC 62
           +SL+G S A   V   + ++A  D  VL++GE GTGKE++A+ LHY SKR E P V +NC
Sbjct: 144 RSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRREAPFVPVNC 203

Query: 63  STLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIE 122
             +   L++SELFGHE G+FTGA     GRFE A GGTLFLDE+   PL +Q KLLRV++
Sbjct: 204 GAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQ 263

Query: 123 YGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPED 182
              +ERVG N+  + +VR++ AT+ NL  M + GTFR DL  RL    I +  LR R ED
Sbjct: 264 ERTFERVGSNKTQSIDVRIIAATHKNLETMIEDGTFREDLYYRLNVFPIEMAPLRERVED 323

Query: 183 IALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNSQ 242
           I LL      RM  E +    + F+  ++  L  + WPGNVREL N+VER    H     
Sbjct: 324 IPLLMNELISRMEHEKRGS--IRFNSASIMSLCRHGWPGNVRELANLVERMAIMHPYGVI 381

Query: 243 PIDQLVFNPFQSSDIVTDESEQV------DVRHTTRTDFHLP------------LDYKAW 284
            + +L     +    V DE EQ+      D+      + H P            LD K +
Sbjct: 382 GVSELP----KKFRYVDDEDEQMVDSLRSDLEERVAINGHTPNFSNHAMLPPEGLDLKDY 437

Query: 285 QQQCDIELLQAALTQAKFNQKHAAQLLGLSYHQFRGMMRKY 325
               +  L+Q AL  A      AA+ L +        MRKY
Sbjct: 438 LGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKY 478