Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Transcriptional regulatory protein zraR from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  218 bits (555), Expect = 3e-61
 Identities = 132/322 (40%), Positives = 180/322 (55%), Gaps = 19/322 (5%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           L+G SPA L  L ++ +++     VL++GE GTGKEL A+ +H  S R +QP + +NCS 
Sbjct: 213 LIGRSPALLQALGELEQVSQSQATVLLLGESGTGKELFARAVHLASGRHDQPFIKVNCSA 272

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           + + L +SELFG+E G+FTGA     G FE+A GGT+FLDE+   PL++Q KLLR ++ G
Sbjct: 273 IPDTLFESELFGYEKGAFTGANTARAGWFEQAHGGTIFLDEIGELPLAMQSKLLRTLQEG 332

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
              R+G  + L  NVRLV ATN +L    Q G FR DL  RL    I LP+LR R ED+ 
Sbjct: 333 TLVRLGSTRELKVNVRLVAATNRDLAHEVQAGRFRQDLYYRLNVIPIRLPSLRERGEDVR 392

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVY--QHGLNSQ 242
            LA HF  R  +  Q    V  +P+AL +L+A+ WPGN+REL N++ER V    H L   
Sbjct: 393 ALALHFVNRANQAHQRN--VNLAPDALARLEAHDWPGNIRELGNLIERLVLLADHTL--- 447

Query: 243 PIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAKF 302
            +       F         SE             L  DY++ Q     + L+ AL + + 
Sbjct: 448 -VTAATLERFMPQGTTAAASEAAP----------LVRDYQSAQSH-SAQALREALARHQG 495

Query: 303 NQKHAAQLLGLSYHQFRGMMRK 324
           NQ  AAQ LGL+  QF   +RK
Sbjct: 496 NQSRAAQSLGLTLRQFAYRLRK 517