Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., nitrogen regulation protein NR(I) from Magnetospirillum magneticum AMB-1

 Score =  205 bits (522), Expect = 2e-57
 Identities = 133/329 (40%), Positives = 182/329 (55%), Gaps = 16/329 (4%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           L+G SPA   +   ++RL   D  V++ GE GTGKEL+A+ LH   KR   P V++N + 
Sbjct: 143 LIGRSPAMQEIYRTLARLMSTDLSVMITGESGTGKELVARALHDYGKRRNGPFVAINMAA 202

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           +   LI+SELFGHE G+FTGA  R  GRFE+AEGGTLFLDE+   P   Q +LLRV++ G
Sbjct: 203 IPRELIESELFGHEKGAFTGATQRAAGRFEQAEGGTLFLDEIGDMPPEAQTRLLRVLQEG 262

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           +Y  VGG   + ANVR+V AT+ +L Q+ +QG FR DL  RL    I LP LR R EDI 
Sbjct: 263 EYTTVGGRTPIRANVRIVAATHRDLTQLIRQGLFREDLFYRLNVVPIRLPPLRERSEDIP 322

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER--AVY-QHGLNS 241
            L  HF  +   E  LP        A+ +L+ + WPGNVREL+N+V R  A+Y Q  +  
Sbjct: 323 ELIRHFLAQAGAE-GLPSKT-IDGQAMDRLRKHRWPGNVRELENLVRRLAALYSQEVIGI 380

Query: 242 QPIDQLVFNPFQSSDIVT----DESEQVDVRHTTRTDFHLPLD-------YKAWQQQCDI 290
           + I+Q +      +D ++     E     V    R  F    D       Y    ++ + 
Sbjct: 381 EVIEQELVGGTPHADAISGGVEGEGLSATVERHLREYFGNHGDGLPPAGVYDRVLREVER 440

Query: 291 ELLQAALTQAKFNQKHAAQLLGLSYHQFR 319
            L+  AL   + NQ  AA LLG++ +  R
Sbjct: 441 PLVTIALEATRGNQIKAAHLLGVNRNTLR 469