Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Psp operon transcriptional activator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  417 bits (1071), Expect = e-121
 Identities = 208/324 (64%), Positives = 253/324 (78%), Gaps = 4/324 (1%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           + +LLGE+  FL VL++VSRLAP+D+PVL+IGERGTGKELIA RLHYLS RW+ PL+SLN
Sbjct: 10  KDNLLGEANRFLEVLEQVSRLAPLDKPVLIIGERGTGKELIANRLHYLSSRWQGPLISLN 69

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C+ L+E L+DSELFGHE+G+FTGA+ RH GRFERA+GGTLFLDELATAP+ VQEKLLRVI
Sbjct: 70  CAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVI 129

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           EYG+ ERVGG+Q L  NVRLVCATNA+LP M ++GTFRADLLDRLAFDV+ LP LR R  
Sbjct: 130 EYGELERVGGSQPLQVNVRLVCATNADLPAMVKEGTFRADLLDRLAFDVVQLPPLRERQS 189

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNS 241
           DI L+AEHFAI+MCREL+LPLF GF+  A   L  Y+WPGNVRELKNVVER+VY+HG + 
Sbjct: 190 DIMLMAEHFAIQMCRELRLPLFPGFTDRAKETLLHYAWPGNVRELKNVVERSVYRHGSSE 249

Query: 242 QPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAK 301
           QP+D++V +PFQ                       LPL  + +Q Q +  LLQ +L QAK
Sbjct: 250 QPLDEIVIDPFQRH----PAEPPAPALPAASVTPDLPLKLREFQLQQEKALLQRSLQQAK 305

Query: 302 FNQKHAAQLLGLSYHQFRGMMRKY 325
           FNQK AA LL L+YHQFR +++K+
Sbjct: 306 FNQKRAADLLALTYHQFRALLKKH 329