Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., phage shock protein operon transcriptional activator from Erwinia tracheiphila SCR3

 Score =  412 bits (1059), Expect = e-120
 Identities = 208/328 (63%), Positives = 252/328 (76%), Gaps = 16/328 (4%)

Query: 4   SLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCS 63
           SLLGE+  FL VL++VSR+A +D+PVLVIGERGTGKELIA RLHYLS+RW+ P +SLNC+
Sbjct: 7   SLLGEANNFLEVLEQVSRVAVLDKPVLVIGERGTGKELIASRLHYLSERWQGPFISLNCA 66

Query: 64  TLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEY 123
            L+E L+DSELFGHE+G+FTGA+ RH GRFERA+ GTLFLDELATAP+ VQEKLLRVIEY
Sbjct: 67  ALNESLLDSELFGHEAGAFTGAQKRHLGRFERADSGTLFLDELATAPMLVQEKLLRVIEY 126

Query: 124 GQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDI 183
           GQ ERVGG+Q L  +VRLVCATN +LP +A+QG FRADLLDRLAFDV+ LP LR R  DI
Sbjct: 127 GQLERVGGSQPLQVSVRLVCATNDDLPLLARQGKFRADLLDRLAFDVVQLPPLRKRRSDI 186

Query: 184 ALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNSQP 243
            LLAEHFAI+MCREL LPLF GFS  A  +L  Y WPGNVRELKNVVER++Y+HG+  +P
Sbjct: 187 LLLAEHFAIQMCRELTLPLFPGFSTTARQKLLEYDWPGNVRELKNVVERSLYRHGVTDRP 246

Query: 244 IDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFH------LPLDYKAWQQQCDIELLQAAL 297
           +D+++ NPFQ          Q      T +D H      LP D + WQ Q +  LL  +L
Sbjct: 247 VDRIIINPFQ----------QEPYTQNTESDVHEVQLPALPFDLRHWQNQQEKALLLKSL 296

Query: 298 TQAKFNQKHAAQLLGLSYHQFRGMMRKY 325
            Q++FNQ+ AA LLGL+YHQ R MM+K+
Sbjct: 297 QQSRFNQRRAAALLGLTYHQLRAMMKKH 324