Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., psp operon transcriptional activator PspF from Enterobacter asburiae PDN3

 Score =  399 bits (1026), Expect = e-116
 Identities = 199/324 (61%), Positives = 252/324 (77%), Gaps = 6/324 (1%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           + +LLGE+ +FL VL++VSRLAP+++PVL+IGERGTGKELIA RLHYLS RW+ P +SLN
Sbjct: 5   KDNLLGEANSFLEVLEQVSRLAPLNKPVLIIGERGTGKELIANRLHYLSGRWDGPFISLN 64

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C+ L+E L+D+ELFGHE+G+FTGA+ RH GRFERA+GGTLFLDELATAP+ VQEKLLRVI
Sbjct: 65  CAALNENLLDTELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVI 124

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           EYG+ ERVGG+Q L  NVRLVCATNANLP+M  +  FRADLLDRLAFDV+ LP LR R  
Sbjct: 125 EYGELERVGGSQPLQVNVRLVCATNANLPEMVAEEKFRADLLDRLAFDVVQLPPLRERKS 184

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNS 241
           DI LLA+ FAI+MCREL LPLF GFS  A   L AY WPGN+RELKNVVER+VY+HG + 
Sbjct: 185 DIMLLADQFAIQMCRELGLPLFPGFSDYAQETLLAYHWPGNIRELKNVVERSVYRHGSSE 244

Query: 242 QPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAK 301
             +D ++ +PFQ S      +  +    ++     LPLD + +Q   + +LL+ +L  AK
Sbjct: 245 TELDNIIIDPFQRS------APPLSAPTSSGDLPTLPLDLRHFQNDQEKQLLEQSLKTAK 298

Query: 302 FNQKHAAQLLGLSYHQFRGMMRKY 325
           +NQK AA+LLGL+YHQ R +++K+
Sbjct: 299 YNQKRAAELLGLTYHQLRALLKKH 322