Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., phage shock protein operon transcriptional activator from Escherichia coli ECRC100

 Score =  418 bits (1075), Expect = e-122
 Identities = 205/324 (63%), Positives = 256/324 (79%), Gaps = 5/324 (1%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           + +LLGE+ +FL VL++VS LAP+D+PVL+IGERGTGKELIA RLHYLS RW+ P +SLN
Sbjct: 5   KDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLN 64

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C+ L+E L+DSELFGHE+G+FTGA+ RH GRFERA+GGTLFLDELATAP+ VQEKLLRVI
Sbjct: 65  CAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVI 124

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           EYG+ ERVGG+Q L  NVRLVCATNA+LP M  +GTFRADLLDRLAFDV+ LP LR R  
Sbjct: 125 EYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERES 184

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNS 241
           DI L+AEHFAI+MCRE++LPLF GF+  A   L  Y WPGN+RELKNVVER+VY+HG + 
Sbjct: 185 DIMLMAEHFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSD 244

Query: 242 QPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAK 301
            P+D ++ +PF+         + + V  TT     LPLD + +Q Q + ELLQ +L Q K
Sbjct: 245 YPLDDIIIDPFKR----RPPEDAIAVSETTSLP-TLPLDLREFQMQQEKELLQLSLQQGK 299

Query: 302 FNQKHAAQLLGLSYHQFRGMMRKY 325
           +NQK AA+LLGL+YHQFR +++K+
Sbjct: 300 YNQKRAAELLGLTYHQFRALLKKH 323