Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., formate hydrogenlyase transcriptional activator FlhA from Dickeya dadantii 3937

 Score =  215 bits (548), Expect = 2e-60
 Identities = 111/230 (48%), Positives = 155/230 (67%), Gaps = 1/230 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           ++G S A   VL++V  +A  D  VL++GE GTGKELIA+ +H LS+R  Q +V +NC+ 
Sbjct: 394 IIGRSAAIRQVLEQVEMVAASDSTVLILGETGTGKELIARAIHSLSQRKAQHMVKMNCAA 453

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           +  GL++S+LFGHE G+FTGA  + QGRFE+A+  TLFLDE+   PL +Q KLLRV++  
Sbjct: 454 IPSGLLESDLFGHEKGAFTGATSQRQGRFEQADNSTLFLDEVGDIPLELQPKLLRVLQER 513

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           + ER+GG++V++ +VRL+ ATN +L QM     +R+DL  RL    I +P LR RPEDI 
Sbjct: 514 EIERLGGSKVISVDVRLIAATNRDLKQMVADREYRSDLYYRLNVFPIVIPPLRERPEDIP 573

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAV 234
           LL + F  ++ R +   +      + L QL    WPGNVREL+NVVERAV
Sbjct: 574 LLVKFFTRKIARRMNRTI-DSIPSDMLRQLSRLPWPGNVRELENVVERAV 622