Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., psp operon transcriptional activator from Escherichia coli BL21

 Score =  416 bits (1069), Expect = e-121
 Identities = 204/324 (62%), Positives = 256/324 (79%), Gaps = 5/324 (1%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           + +LLGE+ +FL VL++VS LAP+D+PVL+IGERGTGKELIA RLHYLS RW+ P +SLN
Sbjct: 5   KDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLN 64

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C+ L+E L+DSELFGHE+G+FTGA+ RH GRFERA+GGTLFLDELATAP+ VQEKLLRVI
Sbjct: 65  CAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVI 124

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           EYG+ ERVGG+Q L  NVRLVCATNA+LP M  +GTFRADLLDRLAFDV+ LP LR R  
Sbjct: 125 EYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERES 184

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNS 241
           DI L+AE+FAI+MCRE++LPLF GF+  A   L  Y WPGN+RELKNVVER+VY+HG + 
Sbjct: 185 DIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSD 244

Query: 242 QPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAK 301
            P+D ++ +PF+         + + V  TT     LPLD + +Q Q + ELLQ +L Q K
Sbjct: 245 YPLDDIIIDPFKR----RPPEDAIAVSETTSLP-TLPLDLREFQMQQEKELLQLSLQQGK 299

Query: 302 FNQKHAAQLLGLSYHQFRGMMRKY 325
           +NQK AA+LLGL+YHQFR +++K+
Sbjct: 300 YNQKRAAELLGLTYHQFRALLKKH 323