Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., Regulatory protein AtoC from Azospirillum sp. SherDot2

 Score =  216 bits (551), Expect = 7e-61
 Identities = 111/230 (48%), Positives = 152/230 (66%), Gaps = 1/230 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           +L  SP    +L  ++++A  +  VLV GE GTGKEL+A  +HY S R   P V +NC+ 
Sbjct: 154 ILTASPRMSELLQTIAKVAKSNATVLVTGESGTGKELVAAAIHYNSPRNAGPFVKVNCAA 213

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           + EGL++SE FGHE G+FTGA+ R +GRFE+AE GTLFLDE+     S+Q KLLRV++  
Sbjct: 214 VPEGLLESEFFGHERGAFTGAQARRRGRFEQAEHGTLFLDEIGDISPSLQVKLLRVLQER 273

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           ++ERVGG +++  +VR++ ATN NL +M +QG FR DL  RL    +    LR RPED+ 
Sbjct: 274 EFERVGGAELVRTDVRVIVATNRNLEEMVRQGLFRQDLYFRLNVVTLRTVPLRERPEDVR 333

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAV 234
           LLA HF  R   E ++ +  G    A+ +L AY WPGN+REL N +ERAV
Sbjct: 334 LLASHFLQRFAAENRIDV-SGIDEQAMERLLAYRWPGNIRELSNAMERAV 382