Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Psp operon transcriptional activator from Azospirillum sp. SherDot2

 Score =  342 bits (877), Expect = 8e-99
 Identities = 184/330 (55%), Positives = 233/330 (70%), Gaps = 10/330 (3%)

Query: 4   SLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCS 63
           SLLGESPAFLA L  VSR+AP++RPVLVIGERGTGKELIA RLHYLS+RW++P + +NC+
Sbjct: 7   SLLGESPAFLATLTHVSRVAPLERPVLVIGERGTGKELIAARLHYLSQRWDRPFIKMNCA 66

Query: 64  TLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEY 123
            L E L+DSELFGHE+G+FTGA  R  GR E+A+GGTLFLDE+ATA  +VQEKLLR +EY
Sbjct: 67  ALPESLLDSELFGHEAGAFTGATRRQIGRIEQADGGTLFLDEIATASPAVQEKLLRAVEY 126

Query: 124 GQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDI 183
           G+ ERVGG +    +VR+V ATNA+LP +A  G FRADLLDRLAFDV+ LP LR RP+DI
Sbjct: 127 GEIERVGG-RTATVDVRVVGATNADLPALAAAGRFRADLLDRLAFDVVTLPPLRARPDDI 185

Query: 184 ALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNSQP 243
             LAEHFA+ M RELQ PLF GF+  AL +L  + WPGNVREL+N VER+V       +P
Sbjct: 186 PPLAEHFALGMIRELQRPLFPGFTDAALDRLCGHDWPGNVRELRNAVERSVAAAD-PDEP 244

Query: 244 IDQLVFNPFQS------SDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIE--LLQA 295
           +D +V +PF+S      +     E+ + D+            D     Q    E  +L+ 
Sbjct: 245 LDHIVLDPFESPWRPAVAPTARPEAARQDIASPQAKAPAPTFDGGILDQVRTFEASILRD 304

Query: 296 ALTQAKFNQKHAAQLLGLSYHQFRGMMRKY 325
           AL + +FNQ+  A+ LGL YHQ RGM++K+
Sbjct: 305 ALERNRFNQRQTAEALGLGYHQLRGMLKKH 334