Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Nitrogen regulation protein NR(I) from Alteromonas macleodii MIT1002

 Score =  206 bits (523), Expect = 1e-57
 Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 1/225 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           ++GE+PA   V   + RL+     VL+ G+ GTGKEL+A  LH  S R  +P ++LN + 
Sbjct: 141 IIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAHALHRHSPRASKPFIALNMAA 200

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           +   L++SELFGHE G+FTGA+   QGRFE+A+GGTLFLDE+   PL VQ +LLRV+  G
Sbjct: 201 IPADLVESELFGHEKGAFTGAQAARQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADG 260

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           Q+ RVGG+Q ++ +VR++ AT+ NL Q   +G FR DL  RL    +HLP+L  R EDI 
Sbjct: 261 QFYRVGGHQSVSVDVRIIAATHQNLEQRVAEGKFREDLFHRLNVIRVHLPSLNERREDIP 320

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNV 229
           LL  HF  R  +EL +      S +A   +    WPGNVR+L+NV
Sbjct: 321 LLTRHFLRRAAKELDVEA-KSISKDAERVMSQLPWPGNVRQLENV 364