Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  210 bits (535), Expect = 5e-59
 Identities = 130/336 (38%), Positives = 181/336 (53%), Gaps = 18/336 (5%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           L+G S A   +   ++RL   D  +++ GE GTGKEL+A+ LH   KR   P V++N + 
Sbjct: 138 LVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDYGKRRNGPFVAINMAA 197

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           +   LI+SELFGHE G+FTGA+ R  GRFE+AEGGTLFLDE+   P+  Q +LLRV++ G
Sbjct: 198 IPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIGDMPMDAQTRLLRVLQQG 257

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           +Y  VGG   +  +VR+V ATN +L Q   QG FR DL  RL    + LP LR R EDI 
Sbjct: 258 EYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLNVVPLRLPPLRDRAEDIP 317

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER--AVY------- 235
            L  HF      E +      F   AL  ++AY+WPGNVREL+N++ R  A+Y       
Sbjct: 318 DLVRHFI--QTGEKEGLEGKRFETEALEVMKAYAWPGNVRELENLIRRLMALYPQEVITR 375

Query: 236 -------QHGLNSQPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQC 288
                  Q  +   P+D++       +     E    D   +       P  Y    ++ 
Sbjct: 376 EIIEQELQSDVPDSPLDKMAVRTGSLTISQAVEENMRDYFASFGDGLPPPGLYDRVLREL 435

Query: 289 DIELLQAALTQAKFNQKHAAQLLGLSYHQFRGMMRK 324
           +  L+ AALT  + NQ  AA LLGL+ +  R  +R+
Sbjct: 436 EYPLILAALTATRGNQIKAADLLGLNRNTLRKKIRE 471