Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  163 bits (412), Expect = 7e-45
 Identities = 114/348 (32%), Positives = 178/348 (51%), Gaps = 24/348 (6%)

Query: 14  LLVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQF-PATTAAGDRAVLAFRVPGQLQTI 72
           L+ GC +  P   E D+ P ++     G     + F PA   A +R+ L+FRV G++   
Sbjct: 25  LIAGCSE--PTKLERDTLP-RVKVAQAGEKVSDKLFFPAVANAAERSHLSFRVAGEISKF 81

Query: 73  DVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRLRQDKVVSEQDFDQA 132
            V  G  VK+G++LA + P +Y L    A A F + D Q++R+Q L +  ++++  FD+ 
Sbjct: 82  HVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQPLVEKGLLAKSQFDEI 141

Query: 133 QANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQGVMNIQTNQLLKVQ 192
            A    A+A  E AK  L +TQL AP DG IS + AEQ+E V   Q ++NI     ++V 
Sbjct: 142 AAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIVNIHNIDSVEVL 201

Query: 193 FLLPDHL--LNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADSKTRSYKVTMVMERPN 250
             LPD L      + +  +   V      + YP + +E  TE D  T ++ VT+ +  P 
Sbjct: 202 IQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATGTFTVTLSLPMPE 261

Query: 251 DVGILPGMAGRVSL------MAPSGSATVIPTSALFAEQG------GKYVWRVDDAGLVS 298
              IL GMA  VS       + P  + + IP  A+F   G       +YVW +++   VS
Sbjct: 262 QELILDGMAVEVSAKGQHVGLNPLNTIS-IPIEAIFNADGDELDKTAQYVWLLNNDNTVS 320

Query: 299 KAAVTL----NEQRQVLTGLNDGDRIIISGVSGVTEGIKVREWVKERG 342
           K  V L        QV  G+N GDR++++GV+ + +G+KV + ++ERG
Sbjct: 321 KRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKV-QVLEERG 367