Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum UW163

 Score =  119 bits (299), Expect = 1e-31
 Identities = 104/346 (30%), Positives = 157/346 (45%), Gaps = 29/346 (8%)

Query: 14  LLVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQLQTID 73
           LL GCGKE    PE   RP +  TV       + +F         + L FRVPG++    
Sbjct: 42  LLAGCGKEQSKAPEV--RPVRTMTVVSEQAAGTVEFSGDVRPRIESRLGFRVPGKIIARL 99

Query: 74  VLAGQEVKKGEVLARLNPDEYALLEQQASANFQ-------LADVQFQRAQRLRQDKVVSE 126
           V  G  V+K +VLARL+P + AL +Q A A  Q       LA    +R   L     +S 
Sbjct: 100 VDVGATVRKSQVLARLDPTDLALAQQSAQAQLQAAKTDRDLAAADLKRFSELFARGFISA 159

Query: 127 QDFDQAQANHNSAKATWEQAKANLR-------YTQLIAPYDGTISLIPAEQYEYVAAKQG 179
            +  + QAN+++A+A ++QA A  R       Y  L A  DG ++ + AE  + V+A Q 
Sbjct: 160 AEQQRHQANYDAAQARYDQAAAGYRNQSNQAAYATLEADADGVVTGVDAEVGQVVSAGQP 219

Query: 180 VMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADSKTRS 239
           V+ +      +V   +P+  ++   R   +  +   + P+R  P + +EI   AD  TR+
Sbjct: 220 VVRVAQTAEKEVVVGIPEDQVDAL-RKSPDVRIKLWADPSRSLPGKVREIAPAADPVTRT 278

Query: 240 YKVTMVMERPNDVGILPGMAGRVSLMAPSGSA------TVIPTSALFAEQGGKYVWRVDD 293
           Y V + +  P    +  GM    + + P G A        +P +AL  EQG   VW  D 
Sbjct: 279 YTVKITVPNP-PPDLKLGMTAVATFVRPGGGADSGGMGVRVPITALLQEQGRNVVWLYDA 337

Query: 294 AG-LVSKAAVTLNEQRQ----VLTGLNDGDRIIISGVSGVTEGIKV 334
           A   V    VT+   R     V  GL+ G  I+ +GV  +  G +V
Sbjct: 338 ASQTVKPVPVTVGAPRDNVLLVTGGLSPGQTIVTAGVHLLKAGQRV 383