Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., efflux RND transporter periplasmic adaptor subunit EmhA from Pseudomonas protegens RBAN4

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 32/349 (9%)

Query: 12  STLLVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQLQT 71
           ++LL GC KE    P P +    + T+     T + + P  T A   A +  +V G +  
Sbjct: 17  ASLLSGCKKE-EAAPAPQAPQVGVVTLQPQAFTLTSELPGRTTAFRIAEVRPQVNGIILK 75

Query: 72  IDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRLRQDKVVSEQDFDQ 131
                G +VK+G+ L +++P  Y    + A AN Q       R ++L  ++ VS Q++D 
Sbjct: 76  RLFKEGGDVKEGQQLYQIDPSVYEATLKSAEANLQSTKSISDRYKQLVNEQAVSRQEYDT 135

Query: 132 AQANHNSAKATWEQAKANLRYTQLIAPYDGTI--------SLIPAEQYEYVAAKQGVMNI 183
           A AN   ++A+ + A+ NLRYT++++P  G I        +L+   Q + +A  Q +  I
Sbjct: 136 AVANRLQSEASLQSAQINLRYTKVLSPLTGRIGRSSVTEGALVSNGQADAMAVIQQLDPI 195

Query: 184 QTN------QLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADSKT 237
             +      +LL+++  L    L +   +  +  +  +     +   + +  +   D  T
Sbjct: 196 YVDVTQSSVELLELRRELESGRLQKVGDNAAKVKLTLEDGSQYKLDGKLEFSEVSVDETT 255

Query: 238 RSYKVTMVMERPNDVGILPGMAGRVSLMAPSGSATVIPTSALFAEQGGKYVWRVDDAGLV 297
            S  +  V   P    +LPGM     L A   SA +     L  +QG     +     LV
Sbjct: 256 GSVTLRAVFPNPEHT-LLPGMFVHAQLQAGVNSAAI-----LAPQQGVTRDLKGTPTALV 309

Query: 298 -----------SKAAVTLNEQRQVLTGLNDGDRIIISGVSGVTEGIKVR 335
                       KA+ T+  Q  V  GL  GDR+I  G+  V  GI+V+
Sbjct: 310 VGPDNKVELRQLKASRTVGSQWLVEDGLKAGDRLITEGLQFVKPGIEVK 358