Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 13/287 (4%)

Query: 52  TTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQ 111
           T    +   L   + G++  I+   G  V++G++L  +N  E     Q+  +N +L +  
Sbjct: 65  TVIPNEDVELRSEIAGRVTGINFEEGSRVRQGQLLLTVNDAEMRAQLQKLESNRKLYEDM 124

Query: 112 FQRAQRLRQDKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQY 171
            +R + L + + +SEQ++DQ      +A A  +  KA+L    + AP+DG I L    + 
Sbjct: 125 EKRQRTLLEKEYISEQEYDQVSNQLATATADIQALKASLAKAYVRAPFDGVIGLRQVSEG 184

Query: 172 EYVAAKQGVMNIQTNQLLKVQFLLPDHLLNRFSR---DGVEAHMVFDSFPNRQYPLQFQE 228
            YV+A   +  +     +K+ F +P     R+S+   +G +     +  P   Y  +   
Sbjct: 185 SYVSATTPIARLVDISPVKIDFAIP----GRYSQEVHEGDQITFTVEGSP-ETYQAKVYA 239

Query: 229 IDTEADSKTRSYKVTMVMERPNDVGILPGMAGRVSL-MAPSGSATVIPTSALFAEQGGKY 287
           I    D  TR+ +V  + +  N+  + PG   +VS+ +     A +IPT A+  E  G  
Sbjct: 240 IQPNIDPTTRTLQVRALFDNKNE-EVRPGAFVKVSITLKDVDDAILIPTEAIIPEATGHK 298

Query: 288 VWRVDDAGLVS---KAAVTLNEQRQVLTGLNDGDRIIISGVSGVTEG 331
           V+ V     V    K         Q++ G+  GD +I +G+  V  G
Sbjct: 299 VFLVKGGKAVPQMVKIGQRSETMIQIMEGITPGDTLIQAGILQVRPG 345