Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  106 bits (265), Expect = 8e-28
 Identities = 82/343 (23%), Positives = 154/343 (44%), Gaps = 11/343 (3%)

Query: 1   MNKTLLAFSICSTLLVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAV 60
           M + L+   +C+ LL     E     + +     +T+    + T ++ + +   +     
Sbjct: 1   MKRILMLMGLCA-LLCNTSCESKKEEKEEKVTFMVTSPMKMDTTVTKDYVSQIHSISHIE 59

Query: 61  LAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRLRQ 120
           L  +  G LQ I V  GQ VKKG++L ++ P  Y    Q A A    AD+++Q  ++L  
Sbjct: 60  LRAQERGYLQKIFVDEGQTVKKGQLLFQITPTLYEAELQSAQAEVNFADIEYQNTKKLAD 119

Query: 121 DKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQGV 180
             +VS  +   A+A  + AKA    AK +L++TQ+ AP+DG I          V   + +
Sbjct: 120 SNIVSPNELAMAKAKLDKAKAELALAKVHLQFTQIKAPFDGIIDRFHVRLGSLVDEGELL 179

Query: 181 MNIQTNQLLKVQFLLP-----DHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADS 235
            N+  N  + V + +P     D+  +      V+  ++  +     +P   + I+ + ++
Sbjct: 180 TNLSDNSKMWVYYNVPEAEYLDYKSHEKQDSAVKVKLLMANNKLFSHPGVVETIEADFNN 239

Query: 236 KTRSYKVTMVMERPNDVGILPGMAGRVSLMAPSGSATVIPTSALFAEQGGKYVWRVDDAG 295
           +T +         P+ + +  G  G + +  P  +A +IP  A F     KYV+ VD  G
Sbjct: 240 ETGNIPFRATFPNPDRL-LRHGETGNILMSVPLSNALLIPQKATFEVLDKKYVYVVDKDG 298

Query: 296 LVSKAAVTLNEQR----QVLTGLNDGDRIIISGVSGVTEGIKV 334
           ++    +T+  +      V  GL +GD+ ++ G+  V E  K+
Sbjct: 299 VLKSREITVAAEMPHIYAVQDGLAEGDKFLLEGLRLVRENEKI 341