Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 96/367 (26%), Positives = 160/367 (43%), Gaps = 30/367 (8%)

Query: 5   LLAFSICSTLLVGCGKELPPV----PEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAV 60
           LL+  I   +L  CG +        P   + P     VS  + T    +P T        
Sbjct: 8   LLSAVISPVILSSCGGDEAGQQQMNPAAMAVPVNTYQVSEQSVTGKDTYPGTVVPLQEVE 67

Query: 61  LAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQ-----LADVQ--FQ 113
           L  +V G +  I V  GQ VK+G+ L  ++  +Y    QQA AN Q     LA VQ   +
Sbjct: 68  LRPQVSGYITNIYVEDGQRVKQGQKLYEIDQSKYQAGLQQARANLQSAKANLARVQKDLE 127

Query: 114 RAQRLRQDKVVSEQDFDQAQANHNSAKATWEQAKANLR-------YTQLIAPYDGTISLI 166
           R +RL +   +++Q  D A+    +AKA    A+A ++       Y  + AP+ GTI + 
Sbjct: 128 RYERLAERDAIAKQQVDYARTEVQTAKAQVASAEAQVQSASTDVGYAVINAPFSGTIGIS 187

Query: 167 PAEQYEYVAAKQGVMN-IQTNQLLKVQFLLPDHLLNRFSR--DGVEAHMVFDSFPN--RQ 221
                  V+  Q ++N I +   + V F + +  + RF +   G +   +F    N   +
Sbjct: 188 QVRVGAQVSPGQPLLNTISSMDPIAVDFAINEQEIPRFVKLQQGNQPDSLFTLTLNNGEK 247

Query: 222 YPL--QFQEIDTEADSKTRSYKVTMVMERPNDVGILPGMAGRVSLMAPS-GSATVIPTSA 278
           YP   +   ID     ++ +  V +    PN V ++PGM   V+++    G   VIP  A
Sbjct: 248 YPHNGKLLAIDRAIGRQSGTTTVRVQFPNPNAV-LIPGMTVTVNVLNQDIGDQLVIPNKA 306

Query: 279 LFAEQGGKYVWRVDDAGLVS---KAAVTLNEQRQVLTGLNDGDRIIISGVSGVTEGIKVR 335
           +  + G  YV+ V    +V    +    +N    V  GL +G +I++ G+  + +G KV+
Sbjct: 307 VAEQLGEFYVYVVQGDSVVQQNVQLGTRVNGNVVVREGLKEGQQIVVEGIQRLRQGAKVQ 366

Query: 336 EWVKERG 342
               + G
Sbjct: 367 VGAPQGG 373