Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 74/307 (24%), Positives = 134/307 (43%), Gaps = 25/307 (8%)

Query: 52  TTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQA-------SAN 104
           T  A +   +  RV GQL  I    GQ+V +GE+LA ++P  + +   QA        A 
Sbjct: 82  TVTATNTVTVHSRVSGQLMAIHFQEGQQVSEGELLAEIDPRPFVVALTQAQGQQAKDQAL 141

Query: 105 FQLADVQFQRAQRLRQDKVVSEQDFD-------QAQANHNSAKATWEQAKANLRYTQLIA 157
              A     R Q+L +  +VS Q  D       Q +A   S + +   A+  L Y+++ A
Sbjct: 142 LVNARQDLVRYQQLSKTSLVSGQQLDTQESLVRQYEATVKSDQGSVASAQLQLDYSRITA 201

Query: 158 PYDGTISLIPAEQYEYVAAKQGVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSF 217
           P+ G + L   +   YV +   ++ +     +   F +P+  +    +       V    
Sbjct: 202 PFSGRVGLRQIDIGNYVTSTDNLLVLTQTHPIDAVFTVPESDIATVLKAQKSGQPVLVEA 261

Query: 218 PNR--QYPL---QFQEIDTEADSKTRSYKVTMVMERPNDVGILPGMAGRVSLMAPS-GSA 271
            +R  Q+ L   +   +D + D+ T + K+    +  +D  + P     + +   +  + 
Sbjct: 262 WDRANQHILSQGRLLSMDNQIDATTGTLKLKARFDNADD-ALFPNQFVNIKMKVDTLQNV 320

Query: 272 TVIPTSALFAEQGGKYVWRVDDAGLVSK----AAVTLNEQRQVLTGLNDGDRIIISGVSG 327
            V P++A+     G +VW ++D   VSK      +   +Q  V TGLN G+R++  G+  
Sbjct: 321 VVAPSAAIQMGNEGHFVWVLNDKDQVSKHLVATGIQYGQQTVVSTGLNAGERVVTDGIDR 380

Query: 328 VTEGIKV 334
           +TEG +V
Sbjct: 381 LTEGARV 387