Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 22/298 (7%)

Query: 59  AVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQR---- 114
           + L+F+  G++ +  V  G EVK G+VLARL+P   A   Q A A+ Q A  + Q     
Sbjct: 60  SALSFQATGRVVSRYVEVGDEVKAGQVLARLDPLALAFAVQSAQASVQDAQAKLQNAVIT 119

Query: 115 AQRLRQDKVV----------SEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTIS 164
           A+R R    V          +EQ    AQA  + A+A   +A   L Y +L A +DG I+
Sbjct: 120 AKRQRSLAAVNVTSVESLEEAEQSLTAAQAAVDVAQARRRKASEQLNYAELKAHFDGVIT 179

Query: 165 LIPAEQYEYVAAKQGVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPL 224
            +  E  + VAA Q V+ I           LP+  L   +  G    +     P  ++  
Sbjct: 180 SVSVETGQTVAAGQAVLQIAYLGERDAVVDLPESQLKDVTL-GHRFEVALQMDPAVKWTG 238

Query: 225 QFQEIDTEADSKTRSYKVTMVMERPNDVGILPGMAGRVSLMA-PSGSATVIPTSALFAEQ 283
           + +EI   AD+ TR  +V + +    +   L  +     LMA  +    V+P +A+   Q
Sbjct: 239 ELREIAPAADAATRMRRVKIAIHDAPEAFRLGTVVTVSPLMARNTDKPLVVPATAILERQ 298

Query: 284 GGKYVWRVDDAGL-VSKAAVTLNEQRQ-----VLTGLNDGDRIIISGVSGVTEGIKVR 335
              +VW ++ + L VS   + L    Q     VL GL +G++I+I+GV+ +  G K+R
Sbjct: 299 QAHFVWVINPSSLTVSLREIQLMPASQADSVRVLGGLQEGEQIVIAGVNSLQPGQKIR 356