Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 85/331 (25%), Positives = 155/331 (46%), Gaps = 36/331 (10%)

Query: 36  TTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYA 95
           T+V+  + T    +P T    +   +  +V G +  I V  GQEV KG+ L  ++  +Y 
Sbjct: 40  TSVTSKHVTGLDLYPGTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQ 99

Query: 96  LLEQQASANFQLADVQFQRAQR-------LRQDKVVSEQDFDQAQANHNSAKATWEQAKA 148
              +QA A  + A    +R ++       L + + +++Q  D A+A+  +A++    A+A
Sbjct: 100 AAYEQAQATLKSAKANLERVKKDLARYEALDKQEAIAKQQLDYAKADILTAESQVSSAEA 159

Query: 149 NLR-------YTQLIAPYDGTISLIPAEQYEYVAAKQGVMN-IQTNQLLKVQFLLPDHLL 200
            +R       Y+ + AP+ GT+ +        V+A Q ++N + +N  + V F++ +  +
Sbjct: 160 QVRSTLTDYNYSVITAPFSGTVGISQVRLGAQVSAGQSLLNTLSSNDPVLVDFVVNERDV 219

Query: 201 NRFSRDGVEAHMVFDSFPNRQYPLQFQEID--------TEADSKT--RSYKVTMVMERPN 250
            RFS+      M  +S P+  + +QF E D        T  D     +S  + M +E PN
Sbjct: 220 RRFSK-----MMKNESLPDSTFTIQFGENDVYRHHGELTTIDRAVGRQSGTINMRVEFPN 274

Query: 251 -DVGILPGMAGRVSLMAPS-GSATVIPTSALFAEQGGKYVWRVDDAGLVSKAAVTL---- 304
            D  ++PGM   + ++    G    IP  A+  + G  +V+ V D  +V +  V L    
Sbjct: 275 PDRELIPGMTLNLRVLNQDIGDQIAIPFKAVTEQMGEYFVYVVGDDSVVHQQNVQLGTKV 334

Query: 305 NEQRQVLTGLNDGDRIIISGVSGVTEGIKVR 335
             +  V  GL  G +I++ G+  + EG KV+
Sbjct: 335 GAEIVVREGLKPGQKIVVEGIQKLREGAKVQ 365