Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., efflux RND transporter periplasmic adaptor subunit from Bacteroides stercoris CC31F

 Score =  120 bits (300), Expect = 7e-32
 Identities = 87/342 (25%), Positives = 173/342 (50%), Gaps = 18/342 (5%)

Query: 5   LLAFSICSTLLVGCG-KELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAVLAF 63
           ++  S+ + L   CG K+     E     +++T +    N   ++FP        + L+F
Sbjct: 7   VILLSVLALLFHACGGKDTQDKQELSVSTSQVTALPQNGN---KEFPFIARPFRTSELSF 63

Query: 64  RVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRLRQDKV 123
           RV G +   DV AG   ++G ++A ++P ++ + +++A A ++ +  +F+R + L + + 
Sbjct: 64  RVGGPIDRFDVYAGNRYERGNIIAEIDPRDFRIRKKRAEAVYRQSKAEFERIEALYRKEN 123

Query: 124 VSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQGVMNI 183
           +S   +++A+A++ SAK  ++ A   L  T+L AP+ G +  +  E+++ V A Q V+++
Sbjct: 124 ISASTYEKAKADYISAKTAFDTAVCELEDTRLTAPFTGYVGEVYIEKFQDVKATQPVVSL 183

Query: 184 QTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADSKTRSYKVT 243
                L+++  +P  +    ++      + FD+ P + Y  +  E+         SY +T
Sbjct: 184 IDIHQLRIEIYVPQEIAYA-AQSSDSIRICFDAIPGQTYRAKVIEVSKGTTRNNLSYLLT 242

Query: 244 MVMERPNDVG-ILPGMAGRVSLMAP---SGSATVIPTSAL-FAEQGGKYVWRVDDA-GLV 297
            ++  PN+ G +L GM+G+  L  P   S +   I  +AL      G YVW V+ A   V
Sbjct: 243 AIL--PNEGGKLLGGMSGKAILDTPQAESAAGFCISQAALCHRPSTGDYVWVVNPATSQV 300

Query: 298 SKAAVTLNEQR-----QVLTGLNDGDRIIISGVSGVTEGIKV 334
           S+  VT+ +       Q+  GL  G+ +  SG+  +++G+KV
Sbjct: 301 SRRKVTVAKLLPDGLVQIADGLQIGETLATSGLRFLSDGMKV 342