Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., macrolide transporter membrane fusion protein (MFP) component from Escherichia coli BL21

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 47/301 (15%)

Query: 64  RVPGQLQTIDVLAGQEVKKGEVLARLNPD---------EYALLE-----QQASANFQLAD 109
           +V GQL+T+ V  G +VKK ++L  ++P+         E  L+E     QQA A  +LA 
Sbjct: 67  QVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLAR 126

Query: 110 VQFQRAQRLRQDKVVSEQDFDQA--------------QANHNSAKATWEQAKANLRYTQL 155
           V + R QRL Q K VS+QD D A               A     +A+ + AK NL YT++
Sbjct: 127 VTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRI 186

Query: 156 IAPYDGTISLIPAEQYEYVAAKQGVMNIQT-----NQLLKVQFLLPD--HLLNRFSRDGV 208
           +AP  G ++ I   Q + V A Q   NI T       L+K Q    D  HL     + G 
Sbjct: 187 VAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHL-----KPGQ 241

Query: 209 EAHMVFDSFPNRQYPLQFQEIDTEADSKTRSYKVTMVMERPNDVGILP-GMAGRVSL-MA 266
           +A       P  +Y  Q +++    +    +       E PN  G+L   M  +V + + 
Sbjct: 242 KAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLT 301

Query: 267 PSGSATVIPTSALFAEQG-GKYVWRVDDAGLVSKAAVTLNEQR----QVLTGLNDGDRII 321
              +   IP SAL    G  +Y  ++   G   +  VT+  +     +++ GL  GD ++
Sbjct: 302 DVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVV 361

Query: 322 I 322
           I
Sbjct: 362 I 362