Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Toluene efflux pump periplasmic linker protein TtgG precursor from Alteromonas macleodii MIT1002

 Score =  107 bits (268), Expect = 4e-28
 Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 21/356 (5%)

Query: 5   LLAFSICS-TLLVGCGKELPPVPEPDSRP--AKLTTVSVGNNTFSRQFPATTAAGDRAVL 61
           +L  S+ S + L  C  E P   + +  P   KL TVS   +     FPA  +A     L
Sbjct: 9   ILFLSVLSVSTLSACSSEEPAEQQANVAPRYVKLATVSNIPDFDEFTFPAVVSAVKTVDL 68

Query: 62  AFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRLRQD 121
           +F V G+L   D++ G ++ KG++LA ++   +     +++     A  +  R +++   
Sbjct: 69  SFEVSGRLIQTDLVTGSDINKGKLLATIDRKPFERRVDESTTRLDQAKRELDRIEKMFAQ 128

Query: 122 KVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQGVM 181
           K+V++   D A+ ++  A    + A+ +L YTQL AP+D  +S    E   +VAA   + 
Sbjct: 129 KLVAQSSLDTAKTSYELAVIDLKNAEQDLSYTQLYAPFDAKVSQRLVENNSFVAAGTPIA 188

Query: 182 NIQTNQLLKVQFLLPDHLLNRFSRDGV-EAHMVFDSFPNRQYPLQFQEIDTEADSKTRSY 240
            +Q    +     +P+ LL      G+ +A     +  ++ YP+ + E  T+ D  +++Y
Sbjct: 189 RLQDVSKIYFNINVPERLLTANIGRGIKQASATLATNRSQWYPVNYVEHSTQPDPVSQTY 248

Query: 241 KVTMVMERPNDVGILPGMAG--RVSL---MAPSGSATVIPTSALFAEQ-GGKYVWRV-DD 293
           +V   ME   ++ + PG     +VSL   + P G   V+P  AL  ++  G  VW   D+
Sbjct: 249 EVVFAMEPREELPLTPGARAVVKVSLQGSLYPEG--FVVPVRALVGDKDSGFAVWVYNDE 306

Query: 294 AGLVSKAAVT---LNEQRQVLTGLNDGD-----RIIISGVSGVTEGIKVREWVKER 341
              V+K AV    +  +  ++ G + G+     +++ +G + +   +KV  +  E+
Sbjct: 307 TSSVAKQAVNVKHIENELAIIEGKSQGEITLGQQVVAAGATQMRADMKVLPYQGEK 362