Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., Multidrug resistance protein MdtA from Acinetobacter radioresistens SK82

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 24/334 (7%)

Query: 10  ICSTLLVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQL 69
           +C   L GC +E    P+ +  P  +    +  +   + +     A  +  LAFRV GQ+
Sbjct: 14  MCYLTLGGCSRE---APQTEEIPYVMVAQPLTTHHEQKSYAGEVQARQQTALAFRVGGQV 70

Query: 70  QTIDVLAGQEVKKGEVLARLNPDEYALLE-------QQASANFQLADVQFQRAQRLRQDK 122
                  G  V+ G+VLARL+  +  L         + A A  ++A  + QR ++L    
Sbjct: 71  TARLAEVGDRVRAGQVLARLDVSDAQLQSNAARAQLESAQAALKIAADELQRFRQLLPMN 130

Query: 123 VVSEQDFDQAQANHNSAKATWEQAKAN-------LRYTQLIAPYDGTISLIPAEQYEYVA 175
            VS   +D  +  + SA++ + QA++N        RY QL A   G I+    E  + VA
Sbjct: 131 AVSRSQYDAVENQYKSAESAYRQAQSNYQVSTNQTRYNQLQANRAGVITERNIEVGQVVA 190

Query: 176 AKQGVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADS 235
           A Q    +  +    V   +P+   +   + G  A +   S P  +     +EI   AD 
Sbjct: 191 AGQVAYQLAIDGDRDVVIGIPEQTTSAI-KVGQTAWVTLWSQPQARLAAYVREISPAAD- 248

Query: 236 KTRSYKVTMVMERPNDVGILPGMAGRVSLMAPSGSATVIPTSALFAEQGGKYVWRVDDAG 295
           ++R++KV + + R     I  G + RV       +   +P S++ A +   Y+W +    
Sbjct: 249 ESRTFKVKVAL-REGPSAIQLGQSARVFFDYSQPNVLSVPLSSVSAHEKQPYIWVLQQDQ 307

Query: 296 LVSKAAVTL----NEQRQVLTGLNDGDRIIISGV 325
            + K  V L     +   VL+GL  GD ++I GV
Sbjct: 308 RIHKVPVQLGAYGRDSVPVLSGLKAGDWVVIGGV 341