Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  102 bits (253), Expect = 2e-26
 Identities = 90/318 (28%), Positives = 146/318 (45%), Gaps = 43/318 (13%)

Query: 73  RVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNA-------QARFSVIDSQYRRSQ 125
           +V G++   H  EG  VK+G +LA+I+P  Y+ A D A       QA  +   S   RS+
Sbjct: 88  QVGGQLLSLHFSEGQPVKKGQLLAQIDPRIYQAAYDQAVARQRQDQALAATAKSNLTRSR 147

Query: 126 PLVEKGLLAKSQFDEI---AAQRQIA----RAELELAKLRLSFTQLRAPMDGIISRVSAE 178
            L  KG ++K   D +   AAQ + A     A +   +++L++T++ +P+D +    + +
Sbjct: 148 DLAAKGYISKQDLDTLRNTAAQYEAAVAADAANVRDTQVQLNYTRVLSPIDSLAGIRAVD 207

Query: 179 QFESVQVGQQIVNIHNIDSVEVLIQLPDR-LYATQPTASELAKIETVVRVPSGQVYPAR- 236
               V     IV +  +  + V+  LP++ L   +  A++      V  +     +P   
Sbjct: 208 PGNVVTTSSAIVTLTQLHPINVMFTLPEQNLDMVRRAAAKDGAALQVTALDRTDAHPIAD 267

Query: 237 ---IKEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPL-NTIS--- 289
              +K    + D +TGTF +    P    EL            GQ V +  L NT+    
Sbjct: 268 GGVLKVVDNQIDTSTGTFRLKSEFPNANNEL----------WPGQFVNVRLLVNTVDGGL 317

Query: 290 -IPIEAIFNA-DGDELDKTAQYVWLLNNDNTVSKRQVRLA-KASRSHVQVSEGINAGDRL 346
            IP +A+    DGD       YV+ +  D+TV  + V +A +   SHV V  G+ AGDR+
Sbjct: 318 VIPAQAVQRGPDGD-------YVYQVQADSTVKMQAVTVAGEVGDSHVMVGSGLKAGDRV 370

Query: 347 VVAGVARLRDGMKVQVLE 364
           V  G  RL+ G KV  L+
Sbjct: 371 VTEGQFRLKPGSKVNALK 388