Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  101 bits (252), Expect = 3e-26
 Identities = 72/297 (24%), Positives = 136/297 (45%), Gaps = 16/297 (5%)

Query: 66  ERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQ 125
           E   L   +AG ++  + +EG+RV+QG +L  +   + R  +   ++   + +   +R +
Sbjct: 70  EDVELRSEIAGRVTGINFEEGSRVRQGQLLLTVNDAEMRAQLQKLESNRKLYEDMEKRQR 129

Query: 126 PLVEKGLLAKSQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQV 185
            L+EK  +++ ++D+++ Q   A A+++  K  L+   +RAP DG+I      +   V  
Sbjct: 130 TLLEKEYISEQEYDQVSNQLATATADIQALKASLAKAYVRAPFDGVIGLRQVSEGSYVSA 189

Query: 186 GQQIVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPD 245
              I  + +I  V++   +P R         ++    T     S + Y A++       D
Sbjct: 190 TTPIARLVDISPVKIDFAIPGRYSQEVHEGDQI----TFTVEGSPETYQAKVYAIQPNID 245

Query: 246 PATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDK 305
           P T T  V        +E +  G  V+VS   + V     + I IP EAI        + 
Sbjct: 246 PTTRTLQVRALFDNKNEE-VRPGAFVKVSITLKDVD----DAILIPTEAIIP------EA 294

Query: 306 TAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQV 362
           T   V+L+     V  + V++ + S + +Q+ EGI  GD L+ AG+ ++R G  + +
Sbjct: 295 TGHKVFLVKGGKAV-PQMVKIGQRSETMIQIMEGITPGDTLIQAGILQVRPGSDLSI 350