Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  108 bits (269), Expect = 3e-28
 Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 19/299 (6%)

Query: 68  SHLSFRVA--GEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQ 125
           SH+  R    G + K  V EG  VK+G +L +I PT Y   + +AQA  +  D +Y+ ++
Sbjct: 56  SHIELRAQERGYLQKIFVDEGQTVKKGQLLFQITPTLYEAELQSAQAEVNFADIEYQNTK 115

Query: 126 PLVEKGLLAKSQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQV 185
            L +  +++ ++     A+   A+AEL LAK+ L FTQ++AP DGII R        V  
Sbjct: 116 KLADSNIVSPNELAMAKAKLDKAKAELALAKVHLQFTQIKAPFDGIIDRFHVRLGSLVDE 175

Query: 186 GQQIVNIHNIDSVEVLIQLPDRL---YATQPTASELAKIETVVRVPSGQVYPARIKEFTT 242
           G+ + N+ +   + V   +P+     Y +        K++ ++       +P  ++    
Sbjct: 176 GELLTNLSDNSKMWVYYNVPEAEYLDYKSHEKQDSAVKVKLLMANNKLFSHPGVVETIEA 235

Query: 243 EPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPL-NTISIPIEAIFNADGD 301
           + +  TG      + P P++ L            G  +   PL N + IP +A F    +
Sbjct: 236 DFNNETGNIPFRATFPNPDRLL-------RHGETGNILMSVPLSNALLIPQKATF----E 284

Query: 302 ELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKV 360
            LDK  +YV++++ D  +  R++ +A        V +G+  GD+ ++ G+  +R+  K+
Sbjct: 285 VLDK--KYVYVVDKDGVLKSREITVAAEMPHIYAVQDGLAEGDKFLLEGLRLVRENEKI 341