Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 88/338 (26%), Positives = 157/338 (46%), Gaps = 33/338 (9%)

Query: 50  EKVSDKLFFPAVANAAERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEPTDY------ 103
           + V+ K  +P      +   L  +V+G I+  +V++G RVKQG  L EI+ + Y      
Sbjct: 48  QSVTGKDTYPGTVVPLQEVELRPQVSGYITNIYVEDGQRVKQGQKLYEIDQSKYQAGLQQ 107

Query: 104 -RLAVDNAQARFSVIDSQYRRSQPLVEKGLLAKSQFDEIAAQRQIARAELELAKLR---- 158
            R  + +A+A  + +     R + L E+  +AK Q D    + Q A+A++  A+ +    
Sbjct: 108 ARANLQSAKANLARVQKDLERYERLAERDAIAKQQVDYARTEVQTAKAQVASAEAQVQSA 167

Query: 159 ---LSFTQLRAPMDGIISRVSAEQFESVQVGQQIVN-IHNIDSVEVLIQLPDR---LYAT 211
              + +  + AP  G I          V  GQ ++N I ++D + V   + ++    +  
Sbjct: 168 STDVGYAVINAPFSGTIGISQVRVGAQVSPGQPLLNTISSMDPIAVDFAINEQEIPRFVK 227

Query: 212 QPTASELAKIETVVRVPSGQVYP--ARIKEFTTEPDPATGTFTVTLSLPMPEQELILDGM 269
               ++   + T+  + +G+ YP   ++          +GT TV +  P P   LI  GM
Sbjct: 228 LQQGNQPDSLFTLT-LNNGEKYPHNGKLLAIDRAIGRQSGTTTVRVQFPNPNAVLI-PGM 285

Query: 270 AVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDKTAQYVWLLNNDNTVSKRQVRLAKA 329
            V V+   Q +G    + + IP +A+    G+       YV+++  D+ V ++ V+L   
Sbjct: 286 TVTVNVLNQDIG----DQLVIPNKAVAEQLGE------FYVYVVQGDSVV-QQNVQLGTR 334

Query: 330 SRSHVQVSEGINAGDRLVVAGVARLRDGMKVQVLEERG 367
              +V V EG+  G ++VV G+ RLR G KVQV   +G
Sbjct: 335 VNGNVVVREGLKEGQQIVVEGIQRLRQGAKVQVGAPQG 372