Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., efflux RND transporter periplasmic adaptor subunit from Fusobacterium nucleatum SB010

 Score =  110 bits (274), Expect = 8e-29
 Identities = 93/356 (26%), Positives = 171/356 (48%), Gaps = 44/356 (12%)

Query: 33  TKLERDTLPRVKVAQAGE--KVSDKLF---FPAVANAAERSHLSFRVAGEISKFHVKEGA 87
           T  ++DT+  ++  +  E   + D+ F   FPA  +  +++ L+F+ AG+I   + + G 
Sbjct: 16  TACKKDTVEVIRAVKIQEINSMQDENFNIDFPAEISPTQKTVLAFKYAGKIKSINFESGD 75

Query: 88  RVKQGDILAEIEPTDYRLAVDNAQARFSV-------IDSQYRRSQPLVEKGLLAKSQFDE 140
            VK+G ++A ++  DY++ ++    ++          ++Q+ R++ L +   LAK  +D 
Sbjct: 76  FVKKGQVIATMDDKDYKVNLEAFSKKYEAAKAVAQNAETQFARAEKLYKGEALAKKDYDN 135

Query: 141 IAAQRQI-------ARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIVNI- 192
              Q+ +       A A LE A+  L+ T++ AP DG I +   E    V  G  +++  
Sbjct: 136 ALMQKNVAISTFKEASAGLENARNTLNDTKIIAPYDGYIDKKIVEVGTVVPEGGPVISFI 195

Query: 193 -HNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATGTF 251
            + I  + V   L D  Y     A+ +   + +    S + YP ++K     PDP   T+
Sbjct: 196 SNEITDISVNASLKDIEYI--KNANSIIFKDNL----SEKTYPLKVKSVAQNPDPINLTY 249

Query: 252 TVTLSLP-MPEQELILDGM--AVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDKTAQ 308
            VT +   + E E  L G    V +S K      N    I IP+ A+F  +G        
Sbjct: 250 PVTFTFSNLSEGEKFLSGQTGTVNISVKN-----NGNQEILIPLNAVFEDNGSN------ 298

Query: 309 YVWLLNNDNTVSKRQVRLAKASRS-HVQVSEGINAGDRLVVAGVARLRDGMKVQVL 363
            V+L  N   V K  +++ +   +  + V +G+ +GD+++VAGV++L DG KV++L
Sbjct: 299 -VYLFKNGIAV-KTPIKIGELRETDKISVVKGLKSGDKVIVAGVSKLADGEKVRLL 352