Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score = 94.0 bits (232), Expect = 6e-24
 Identities = 93/362 (25%), Positives = 171/362 (47%), Gaps = 37/362 (10%)

Query: 24  LLIAGCS-EPTKLERDTLPRVKV---AQAGEKVSDKLFFPAVANAAERSHLSFRVAGEIS 79
           +L+ GC  +  + +    P+V V     A   V+ +L  P   +A   + +  +V+G I 
Sbjct: 18  VLLTGCDGQENQQQHLQAPQVSVHIVKSAPLAVTTEL--PGRTDAFRVAEVRPQVSGIIL 75

Query: 80  KFHVKEGARVKQGDILAEIEPTDYRLAVDNA-------QARFSVIDSQYRRSQPLVEKGL 132
           + +  EG+ VK G+ L +I+P  Y+ A D+A       QA  ++     +R  PLV    
Sbjct: 76  RRNFAEGSDVKAGESLYQIDPATYQAAYDSAKGELAKAQAAANIAHLTVKRYLPLVGTQY 135

Query: 133 LAKSQFDEIAAQRQ-------IARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQV 185
           ++K ++D+  A  Q        A+A +E A++ L++T++ +P+DG I + S  +   V  
Sbjct: 136 VSKQEYDQAVATAQQAEASVVAAKAGVESARINLAYTKVTSPVDGRIGKSSVTEGALVTN 195

Query: 186 GQQ--IVNIHNIDSVEV-LIQLPDRLYATQPTASELAKIETVVRV--PSGQVYPAR--IK 238
           GQ   +  +  +D + V + Q  +     + T+ +     + V +   +GQ YP +  ++
Sbjct: 196 GQAAALATVQQLDPIYVDVTQSSNDFMRLKQTSLQKGDTASSVELLMENGQPYPLKGTLQ 255

Query: 239 EFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNA 298
                 D +TG+ T+    P P Q L+L GM V         G  P + I +P + +   
Sbjct: 256 FSDVTVDESTGSITLRAIFPNP-QHLLLPGMFVRARIDE---GTQP-DAILVPQQGVTRT 310

Query: 299 DGDELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGM 358
              +       V ++N+ N V  R V   +A      V+EG+  GDR++V+G+ ++R G+
Sbjct: 311 PRGDAT-----VLVVNDKNQVEPRTVVAPQAIGDRWLVTEGLKNGDRVIVSGLQKVRPGV 365

Query: 359 KV 360
            V
Sbjct: 366 TV 367