Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  101 bits (252), Expect = 3e-26
 Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 34/316 (10%)

Query: 66  ERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFS-------VID 118
           E + L FR+ G +    V  GA VKQG+++A ++  D    + +A+A  +       + +
Sbjct: 80  EETALGFRLDGRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAE 139

Query: 119 SQYRRSQPLVEKGLLAKSQFDEIAAQ-------RQIARAELELAKLRLSFTQLRAPMDGI 171
              +R + L   G +A+SQ DE  +        R+ A+A +   + RL +T+L AP+ G+
Sbjct: 140 QNLKRMKQLAPNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGV 199

Query: 172 ISRVSAEQFESVQVGQQIVNIHNIDSVEVLIQLPDRLYAT---QPTASELAKIETVVRVP 228
           I+ VSA   + V  GQ++V +      + +  + +RL A+    P  +        ++  
Sbjct: 200 ITAVSANPGQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKT- 258

Query: 229 SGQVYPARIKEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTI 288
                   +++ +   D  T T+ V +SL  P  E++L G  V+       V L   N I
Sbjct: 259 -----QGHVRDVSPLADAQTRTWRVRISLVEPPPEMVL-GATVQ-----GEVTLPGGNVI 307

Query: 289 SIPIEAIFNADGDELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVV 348
           ++P  A+    G    + A +V +     T+  + + L   S S + V++G+ AGD++  
Sbjct: 308 NLPASALTRQGG----RPAVFV-VDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVAT 362

Query: 349 AGVARLRDGMKVQVLE 364
           AGV++LR G KV + E
Sbjct: 363 AGVSKLRAGEKVTLAE 378