Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dadantii 3937

 Score =  100 bits (250), Expect = 5e-26
 Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 40/361 (11%)

Query: 25  LIAGCSEPTKLERDTLPR------VKVAQAGEKVSDKLFFPAVANAAERSHLSFRVAGEI 78
           L++GC++ +       PR      V+ +  GE +S           AE + L FR+ G +
Sbjct: 38  LLSGCNDASNEPAPAPPRPVRTVTVEPSATGEVLSQV----GEIRPAEETALGFRLDGRV 93

Query: 79  SKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFS-------VIDSQYRRSQPLVEKG 131
               V  G  VK G+++A ++  D    + +A+A  +       + +    R + L   G
Sbjct: 94  VSRAVDVGTVVKAGEVIATLDTRDSENQLQSAKADLTRAAASERLAEQNLNRMKQLAPNG 153

Query: 132 LLAKSQFDEIAAQ-------RQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQ 184
            +A+SQ DE  +        R+ A+A ++ A+ RL +T+L AP+ G+I+ VSA   + V 
Sbjct: 154 AIARSQLDEAQSNWASAVSVRESAQASVKSAQDRLEYTRLSAPVAGVITAVSANPGQVVN 213

Query: 185 VGQQIVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQV-YPARIKEFTTE 243
            GQ++V +        +  + +RL     T+     + TV  + +  +     +++ +  
Sbjct: 214 AGQEVVRLATFAGRGAVFNVSERLI----TSGLTDPLVTVSLLSNPAIKTQGHVRDVSPL 269

Query: 244 PDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGDEL 303
            D  T T+ V +SL  P +E++L G  V+       V L     I++P  A+      + 
Sbjct: 270 ADAETRTWRVRVSLIEPPKEMVL-GATVQ-----GEVTLPGGTAIALPASALTR----QG 319

Query: 304 DKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQVL 363
           D  A +V +     T+  + + L   S S + V++G++ GD++V AGV++LR G KV + 
Sbjct: 320 DNPAVFV-VDPQTQTLRLQPITLRHYSDSQIVVADGLSTGDKVVTAGVSKLRAGEKVTLA 378

Query: 364 E 364
           E
Sbjct: 379 E 379