Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 69/299 (23%), Positives = 142/299 (47%), Gaps = 18/299 (6%)

Query: 68  SHLSFRVA--GEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQ 125
           SH+  R    G + K +V EG  VK+G +L +I P  Y+     A+A  S  + +Y+ ++
Sbjct: 58  SHIEVRAQERGYLEKIYVDEGQFVKKGQLLFKIMPKLYQAEFQRAKAEVSFAEIEYQNTK 117

Query: 126 PLVEKGLLAKSQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQV 185
            L ++ ++A ++     A+   A AEL LA+  L FT++RAP +GII R        +  
Sbjct: 118 SLADRDVVAPNELAMAKAKLDKANAELALAQTHLDFTEIRAPFNGIIDRFHVRVGSLIDE 177

Query: 186 GQQIVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVR--VPSGQVY--PARIKEFT 241
           G+ + N+ +   + V   +P+  Y    +  +     T+V   + + +V+  P +++   
Sbjct: 178 GELLTNLSDNSHMWVYYNVPEAEYLDYMSNLKKDSSATMVNLLMANNKVFGHPGKVETIE 237

Query: 242 TEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGD 301
            + +  TG      + P P      +G+          + +   N + IP +  F    +
Sbjct: 238 ADFNHETGNIPFRATFPNP------NGLLRHGETGNIQMSVPFKNAMIIPQKTTF----E 287

Query: 302 ELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKV 360
            LDK  +YV++L+ D+ +  R++ +A        + +G+   D++++ G+  +R+  ++
Sbjct: 288 VLDK--RYVYVLDEDHKLHAREITVAAEMPHLYVIQDGLEENDKVLLEGLRLVRENDEI 344