Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., efflux RND transporter periplasmic adaptor subunit from Bacteroides stercoris CC31F

 Score =  121 bits (303), Expect = 3e-32
 Identities = 92/308 (29%), Positives = 153/308 (49%), Gaps = 15/308 (4%)

Query: 58  FPAVANAAERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVI 117
           FP +A     S LSFRV G I +F V  G R ++G+I+AEI+P D+R+    A+A +   
Sbjct: 49  FPFIARPFRTSELSFRVGGPIDRFDVYAGNRYERGNIIAEIDPRDFRIRKKRAEAVYRQS 108

Query: 118 DSQYRRSQPLVEKGLLAKSQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSA 177
            +++ R + L  K  ++ S +++  A    A+   + A   L  T+L AP  G +  V  
Sbjct: 109 KAEFERIEALYRKENISASTYEKAKADYISAKTAFDTAVCELEDTRLTAPFTGYVGEVYI 168

Query: 178 EQFESVQVGQQIVNIHNIDSVEVLIQLPDRL-YATQPTASELAKIETVVRVPSGQVYPAR 236
           E+F+ V+  Q +V++ +I  + + I +P  + YA Q + S    I        GQ Y A+
Sbjct: 169 EKFQDVKATQPVVSLIDIHQLRIEIYVPQEIAYAAQSSDS----IRICFDAIPGQTYRAK 224

Query: 237 IKEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIF 296
           + E +        ++ +T  LP  E   +L GM+      G+ + L+     S     I 
Sbjct: 225 VIEVSKGTTRNNLSYLLTAILP-NEGGKLLGGMS------GKAI-LDTPQAESAAGFCIS 276

Query: 297 NADGDELDKTAQYVWLLN-NDNTVSKRQVRLAK-ASRSHVQVSEGINAGDRLVVAGVARL 354
            A       T  YVW++N   + VS+R+V +AK      VQ+++G+  G+ L  +G+  L
Sbjct: 277 QAALCHRPSTGDYVWVVNPATSQVSRRKVTVAKLLPDGLVQIADGLQIGETLATSGLRFL 336

Query: 355 RDGMKVQV 362
            DGMKV +
Sbjct: 337 SDGMKVDI 344