Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., efflux RND transporter periplasmic adaptor subunit from Bacteroides stercoris CC31F

 Score =  119 bits (297), Expect = 2e-31
 Identities = 88/353 (24%), Positives = 167/353 (47%), Gaps = 11/353 (3%)

Query: 16  YTAWLAHLLLIAGCSEPTKLERDTLPRVKVAQAGEKVSDKLFFPAVANAAERSHLSFRVA 75
           Y   L   L++  C +    +   +  VK A    +      F  +  A E   L+FRV+
Sbjct: 5   YLFALTVTLIVTSCGQKKGEDIPLVRPVKTATVSSQSVILKDFSGMVEAVEYVKLAFRVS 64

Query: 76  GEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQPLVEKGLLAK 135
           G+I    V EG RV++G ++A I+P D  L     +A +    +Q  R++ L+ +  ++ 
Sbjct: 65  GQIIDLPVVEGQRVRKGQLIAAIDPRDISLQYAADKAAYETAAAQVERNKRLLGRQAISL 124

Query: 136 SQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIVNIHNI 195
            +++   A  Q A++  EL+   +  T+L AP DG I +   E ++ V  G+ IV + N 
Sbjct: 125 QEYEISVANYQKAKSAYELSTNNMRDTKLLAPFDGSIEKRLVENYQRVNSGEGIVRLVNT 184

Query: 196 DSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATG-TFTVT 254
             + +   +PD             K+E       G ++ AR++E+       TG   T+T
Sbjct: 185 QKLRIKFTVPDDYLYLLRAKDATFKVE--FDTYKGNIFNARLEEYLDISTDGTGIPVTIT 242

Query: 255 LSLPMPEQEL--ILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDKTAQYVWL 312
           +  P  ++ +  +  G    +              +++P+ A+F   GD  +K   YVW+
Sbjct: 243 IDDPAFDRAVYDVKPGFTCNIRLASDIAPFIEEKLMNVPLSAVF---GDSENKNT-YVWV 298

Query: 313 LNNDNTVSKRQVRL-AKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQVLE 364
           +  DN VS+R+V + +    +++ +S+G+   + +V+AGV +L +G +V+ +E
Sbjct: 299 V-KDNRVSRREVTVYSPTGEANLLISKGLKPDETVVIAGVYQLVEGQRVKEVE 350