Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., efflux RND transporter periplasmic adaptor subunit from Phocaeicola dorei CL03T12C01

 Score =  120 bits (301), Expect = 6e-32
 Identities = 91/346 (26%), Positives = 173/346 (50%), Gaps = 20/346 (5%)

Query: 23  LLLIAGCSEPTKLER--DTLPRVKVAQAGEKVSDKLFFPAVANAAERSHLSFRVAGEISK 80
           L+L++ C++ T+  +   T+    +  A ++    L FP    AA+   L+FRV+G ISK
Sbjct: 13  LILLSSCTQRTQKAKGYQTVKIDTIVSADKQTF--LQFPGKVKAAQDISLAFRVSGTISK 70

Query: 81  FHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQPLVEKGLLAKSQFDE 140
            HVK+G RV++G +LAE++PTDY++ +D  +A +  I ++  R   L +      +  D+
Sbjct: 71  IHVKDGTRVQEGQLLAELDPTDYQVQLDATEAEYQQIKAEAERVMALYKDNGTTPNANDK 130

Query: 141 IAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIVNIHNIDSVEV 200
                +   A+ +  K +L++T+L AP +G + +   E  E++  G  ++++ +  + EV
Sbjct: 131 AVYGLKQITAKYKHHKDQLAYTRLYAPFNGYVQKRLFEAHETIGAGMPVLSMISSGTPEV 190

Query: 201 LIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATGTFTVTLSLPMP 260
            I LP   Y  +    +         +  G+ YP ++   T + + A   +T+ L +   
Sbjct: 191 EINLPAAEYIRR---DQFDNYHCTFDIYPGETYPLKLISVTPKAN-ANQLYTMRLQVVPG 246

Query: 261 EQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDKTAQYVWLLN-NDNTV 319
              +   GM   V+   +       NT+S+P  AI   +G        YV++ N +DNTV
Sbjct: 247 TPAVPSPGMNTMVTISYR---TEQTNTLSVPTGAILQKEG------KAYVFVFNPSDNTV 297

Query: 320 SKRQVRLAK-ASRSHVQVSEG-INAGDRLVVAGVARLRDGMKVQVL 363
            K+++ + +  +  H  ++ G +  G+ +V +GV  + DG  V+ L
Sbjct: 298 HKQEISMLRLLNNGHSLITAGQLKPGELIVSSGVHHIEDGETVKPL 343