Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Acriflavine resistance protein A precursor from Alteromonas macleodii MIT1002

 Score = 97.8 bits (242), Expect = 4e-25
 Identities = 93/381 (24%), Positives = 172/381 (45%), Gaps = 39/381 (10%)

Query: 12  KIIRYTAWLAHLLLIAGCSEPTKLERD------TLPRVKVAQAG-EKVSDKLFFPAVANA 64
           +I   TA L  L+ + GCS   +  +         P V V     E V  ++  P   + 
Sbjct: 3   RIFYVTAALITLVGVIGCSNEGEQAQQGAQQGMPAPSVSVVTLKQEPVVHEMVLPGRVSP 62

Query: 65  AERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNA-------QARFSVI 117
           + +S +  +V G I++   +EGA V++G  L +I+   Y   +++A       QA    +
Sbjct: 63  SRQSQVRPQVDGVITERLFEEGAHVEKGQQLYQIDEARYLAQLNSAKADLKSVQANLKTL 122

Query: 118 DSQYRRSQPLVEKGLLAKSQFDEIAAQR-------QIARAELELAKLRLSFTQLRAPMDG 170
           +++ RR   LV +  ++K ++D++ AQ+        +A A +++AK+ + +T++ AP+ G
Sbjct: 123 EAKARRYDDLVAQNAVSKQEYDDVIAQKDQAQAAISVAEAAVDVAKVNMGYTKVYAPISG 182

Query: 171 IISR--VSAEQFESVQVGQQIVNIHNIDSVEVLIQLPDRLYATQPTASE---LAKIETVV 225
            ISR  V+     +    QQ+  I  +D V + +Q       T   +        +E  V
Sbjct: 183 RISRSFVTEGTLVTTNQSQQLATITQLDPVFIDMQESGASIITLRQSMRNQGSMDVELTV 242

Query: 226 RVPSGQVY--PARIKEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLN 283
              +G+ Y     +K      D  TG+ T+   +P P+  ++L G+ V    KG HV   
Sbjct: 243 DEVTGKRYDQTGSVKFSEVTVDETTGSVTLRAEMPNPD-GVLLPGLFV----KG-HVITG 296

Query: 284 PLNTISIPIEAIFNADGDELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAG 343
             N + +P  A        L      V+++N +N V  R + + K  R       G++ G
Sbjct: 297 RENALLVPQRATTRQPDGSLS-----VYVVNQNNEVEGRTLEIGKIYRDQYVALSGVSEG 351

Query: 344 DRLVVAGVARLRDGMKVQVLE 364
           ++++V G  +++ G KV   E
Sbjct: 352 EKVIVTGYQKVKPGAKVNPSE 372