Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., Multidrug resistance protein MdtA from Acinetobacter radioresistens SK82

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 83/359 (23%), Positives = 162/359 (45%), Gaps = 39/359 (10%)

Query: 24  LLIAGCSEPTKLERDTLPRVKVAQAGEKVSDKLFFPAVANAAERSHLSFRVAGEISKFHV 83
           L + GCS     + + +P V VAQ      ++  +     A +++ L+FRV G+++    
Sbjct: 17  LTLGGCSREAP-QTEEIPYVMVAQPLTTHHEQKSYAGEVQARQQTALAFRVGGQVTARLA 75

Query: 84  KEGARVKQGDILAEIEPTDYRLA-------VDNAQARFSVIDSQYRRSQPLVEKGLLAKS 136
           + G RV+ G +LA ++ +D +L        +++AQA   +   + +R + L+    +++S
Sbjct: 76  EVGDRVRAGQVLARLDVSDAQLQSNAARAQLESAQAALKIAADELQRFRQLLPMNAVSRS 135

Query: 137 QFDEI--------AAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQ 188
           Q+D +        +A RQ A++  +++  +  + QL+A   G+I+  + E  + V  GQ 
Sbjct: 136 QYDAVENQYKSAESAYRQ-AQSNYQVSTNQTRYNQLQANRAGVITERNIEVGQVVAAGQV 194

Query: 189 IVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPAT 248
              +      +V+I +P++        +   K+     V       AR+  +  E  PA 
Sbjct: 195 AYQLAIDGDRDVVIGIPEQ-------TTSAIKVGQTAWVTLWSQPQARLAAYVREISPAA 247

Query: 249 G---TFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDK 305
               TF V ++L      + L G +  V         +  N +S+P+ ++         +
Sbjct: 248 DESRTFKVKVALREGPSAIQL-GQSARV-----FFDYSQPNVLSVPLSSV------SAHE 295

Query: 306 TAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQVLE 364
              Y+W+L  D  + K  V+L    R  V V  G+ AGD +V+ GV  L D  ++  ++
Sbjct: 296 KQPYIWVLQQDQRIHKVPVQLGAYGRDSVPVLSGLKAGDWVVIGGVHLLHDKQRIHPVD 354